BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027H11SP1|AL428813
(873 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1424 444 e-124
>3x_Contig1424
Length = 9842
Score = 444 bits (224), Expect = e-124
Identities = 227/228 (99%)
Strand = Plus / Minus
Query: 646 ttttagcttcttctcttgccttttcgttttcttcctgttgaatttcttggtagtagatct 705
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 9827 ttttagcttcttctcttgcctttttgttttcttcctgttgaatttcttggtagtagatct 9768
Query: 706 ttgttcttgtttttagtctactgaatggatcactcttggcatccactttatttacacctt 765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9767 ttgttcttgtttttagtctactgaatggatcactcttggcatccactttatttacacctt 9708
Query: 766 cttctctcttgattgtttctgcgtgtctgattcgatcaatattcaattttctgttcttgg 825
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9707 cttctctcttgattgtttctgcgtgtctgattcgatcaatattcaattttctgttcttgg 9648
Query: 826 atgttaaagcacccaaggtctttatgtcattctgatcgttttcatgat 873
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9647 atgttaaagcacccaaggtctttatgtcattctgatcgttttcatgat 9600
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 17,908
Number of Sequences: 1807
Number of extensions: 17908
Number of successful extensions: 2548
Number of sequences better than 1.0e-20: 1
length of query: 873
length of database: 10,358,551
effective HSP length: 16
effective length of query: 857
effective length of database: 10,329,639
effective search space: 8852500623
effective search space used: 8852500623
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)